Chapter 8 – Theoretical Biophysics 385
b The most likely droplet size occurs at the maximum value of ΔG with respect to N,
i.e. when the first derivative of –AN + BN2/3 with respect to N is zero. So:
–A+(2/3)Nc
–1/3 = 0, thus:
Nc = (2B/3A)3
The nucleation energy barrier is given by ΔGmax, i.e. ΔG when N = Nc or:
ΔGmax = B(2B/3A)2/3 – A(2B/3A) = (2B5/3A)2/3 – 2B/3
c Here A = 2 × 10–3 kBT and B = 4.5 × 10–2 kBT so:
Nc = ((2 × 4.5 × 10–2)/(3 × 2 × 10–3))3 = 3375 molecules
ΔGmax = (–2 × 10–3 × 3375) + (4.5 × 10–2 × 33752/3) = 3.4 kBT
With tight-packing, the radius R at the critical droplet radius Rc relates to the
radius of one protein R1 by:
Nc × (4/3)πR1
3 = (4/3)πRc
3 so:
Rc = Nc
(1/3)R1 = 33751/3 × (20/2) = 150 nm
The probability of a given change in free energy ΔG is proportional to the
Boltzmann factor exp(–ΔG/kBT) so the ratio of number of droplets here is:
C = exp(–ΔG(R=1.25Rc))/exp(–ΔGmax(R=Rc)) = exp(ΔGmax(R=Rc) – ΔG(R=1.25Rc))
For droplets of radius R=1.25Rc, the volume greater than the critical radius droplets
by a factor of 1.253 or ~1.95, so N = 1.95 × 3375 or ~6580 molecules, giving:
ΔG(R=1.25Rc) = (–2 × 10–3 × 6580) + (4.5 × 10–2 × 65802/3) = 2.7 kBT
So:
C ≈ exp(3.4/2,7) ≈ 3.5.
d The range for radius of 140–160 nm is centered on the predicted critical radius of
150 nm in this case, while 180–190 nm is ~25% larger than this radius. From the
analysis of part (c), we would therefore predict a greater number of droplets by
a factor of ~3.5 (i.e. ~3.5 × 352 or ~1200 droplets) at the higher radius since the
corresponding change in free energy is smaller for larger droplets. But here fewer
droplets were observed at this higher radius by a factor of 352/55 or ~6. However,
the total number of these protein molecules per cell is ~7000 is only a little larger
than the number of molecules predicted to be present in single droplets with a
radius ~25% larger than the critical droplet radius. In other words, the number
of molecules present in the cell is not sufficient to sustain the growth of droplets
much beyond this, which might account for the far lower proportion of larger
droplets observed than predicted.